EnhancerDB
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  3. rs542583328[chr12:120683010]
Enhancers that have rs542583328[chr12:120683010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542583328[chr12:120683010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120682991 120683011 TP53 JASPAR yes 124158536
chr12 120683000 120683012 TEAD1 JASPAR yes 124158537
chr12 120683002 120683012 TEAD1 JASPAR yes 124158538
chr12 120683002 120683012 TEAD4 JASPAR yes 124158539
chr12 120683003 120683011 TEAD3 JASPAR yes 124158540
chr12 120683003 120683011 TEF-1 TRANSFAC yes 124158541
Genes associated with rs542583328[chr12:120683010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More