EnhancerDB
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  3. rs542588272[chr1:151937163]
Enhancers that have rs542588272[chr1:151937163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs542588272[chr1:151937163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151936585 151937202 SOX2 GTRD no Neural Stem Cells (H9) 21338731
chr1 151936714 151937200 SOX2 GTRD no Neural Stem Cells (H9) 21338733
chr1 151937155 151937166 FOXH1 JASPAR yes 32207367
Genes associated with rs542588272[chr1:151937163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More