EnhancerDB
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  3. rs542601207[chr3:124544555]
Enhancers that have rs542601207[chr3:124544555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542601207[chr3:124544555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124544549 124544565 ZNF143 JASPAR yes 5404140
chr3 124544555 124544566 STAT1 JASPAR yes 5404141
chr3 124544555 124544566 STAT3 JASPAR yes 5404142
Genes associated with rs542601207[chr3:124544555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More