EnhancerDB
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  3. rs542604916[chr1:39634448]
Enhancers that have rs542604916[chr1:39634448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs542604916[chr1:39634448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39634440 39634453 POU3F3 JASPAR yes 28261735
chr1 39634441 39634453 POU3F2 JASPAR yes 28261736
chr1 39634442 39634449 NKX3-1 JASPAR yes 28261737
chr1 39634442 39634453 FOXB1 JASPAR yes 28261738
chr1 39634442 39634453 PROP1 JASPAR yes 28261739
Genes associated with rs542604916[chr1:39634448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More