EnhancerDB
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  3. rs542624430[chr1:235107496]
Enhancers that have rs542624430[chr1:235107496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235107452 235107692 vista5674
VISTA
Transcript factors that have rs542624430[chr1:235107496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 21401778
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884753
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884754
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884755
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884756
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884757
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 21401781
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884761
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884762
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884763
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884764
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 21401785
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884768
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884769
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884770
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884771
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884778
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884779
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884780
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884781
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 21401979
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884861
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884862
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884863
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884864
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 21401999
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884870
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884871
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884872
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884873
chr1 235106757 235107809 ZNF274 GTRD no Liver (HepG2) 21402000
chr1 235106757 235107809 ZNF274 GTRD no Liver (HepG2) 107884874
chr1 235106757 235107809 ZNF274 GTRD no Liver (HepG2) 107884875
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 21402001
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884876
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884877
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884878
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 21402021
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884899
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884900
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884901
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 21402025
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884905
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884906
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884907
chr1 235107139 235107662 ZNF274 GTRD no Bone Marrow (K562) 21402026
chr1 235107139 235107662 ZNF274 GTRD no Bone Marrow (K562) 107884908
chr1 235107139 235107662 ZNF274 GTRD no Bone Marrow (K562) 107884909
chr1 235107156 235108020 ZNF274 GTRD no Blood (GM12878) 21402027
chr1 235107156 235108020 ZNF274 GTRD no Blood (GM12878) 107884910
chr1 235107217 235108537 ZBTB33 GTRD no Lung (A549) 107884911
chr1 235107217 235108537 ZBTB33 GTRD no Lung (A549) 107884912
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 21402029
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 107884913
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 107884914
chr1 235107321 235107841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402030
chr1 235107321 235107841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884915
chr1 235107405 235107717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402031
chr1 235107405 235107717 RUNX3 UCSC Txn Factor no Conserved 107884916
chr1 235107405 235107717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884917
chr1 235107435 235107703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402032
chr1 235107435 235107703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884918
chr1 235107441 235107754 ZBTB33 GTRD no Lung (A549) 107884919
chr1 235107451 235107780 ZNF274 GTRD no Bone Marrow (K562) 21402033
chr1 235107451 235107780 ZNF274 GTRD no Bone Marrow (K562) 107884920
chr1 235107460 235107815 ZNF274 GTRD no Bone Marrow (K562) 21402034
chr1 235107460 235107815 ZNF274 GTRD no Bone Marrow (K562) 107884921
chr1 235107462 235107698 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402035
chr1 235107462 235107698 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884922
chr1 235107478 235107684 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402036
chr1 235107478 235107684 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884923
chr1 235107491 235108081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402037
chr1 235107491 235108081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884924
chr1 235107492 235107506 GATA2 JASPAR yes 36336564
chr1 235107492 235107506 GATA2 JASPAR yes 118486560
chr1 235107492 235108088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402038
chr1 235107492 235108088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884925
chr1 235107494 235107501 GATA3 TRANSFAC yes 36336565
chr1 235107494 235107501 GATA3 TRANSFAC yes 118486561
chr1 235107494 235107502 GATA5 JASPAR yes 36336566
chr1 235107494 235107502 GATA5 JASPAR yes 118486562
Genes associated with rs542624430[chr1:235107496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More