EnhancerDB
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  3. rs542626290[chr2:232542761]
Enhancers that have rs542626290[chr2:232542761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232542757 232542767 vista35173
VISTA
Transcript factors that have rs542626290[chr2:232542761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232542751 232542761 SP1 JASPAR yes 22229955
chr2 232542751 232542761 SP1 JASPAR yes 81735434
chr2 232542754 232542769 FOXP1 JASPAR yes 22229956
chr2 232542754 232542769 FOXP1 JASPAR yes 81735435
chr2 232542759 232542774 FOXP1 JASPAR yes 22229957
chr2 232542759 232542774 FOXP1 JASPAR yes 81735436
chr2 232542760 232542766 TBP TRANSFAC yes 22229958
chr2 232542760 232542766 TBP TRANSFAC yes 81735437
chr2 232542760 232542775 FOXP1 JASPAR yes 22229959
chr2 232542760 232542775 FOXP1 JASPAR yes 81735438
chr2 232542760 232542781 IRF1 JASPAR yes 22229960
chr2 232542760 232542781 IRF1 JASPAR yes 81735439
chr2 232542761 232542776 FOXP1 JASPAR yes 22229961
chr2 232542761 232542776 FOXP1 JASPAR yes 81735440
Genes associated with rs542626290[chr2:232542761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More