EnhancerDB
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  3. rs542638686[chr1:19717183]
Enhancers that have rs542638686[chr1:19717183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542638686[chr1:19717183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19717172 19717193 ZNF263 JASPAR yes 27184298
chr1 19717180 19717185 SP1 TRANSFAC yes 27184299
chr1 19717182 19717187 TFAP2A TRANSFAC yes 27184300
chr1 19717182 19717188 MZF1 JASPAR yes 27184301
Genes associated with rs542638686[chr1:19717183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More