EnhancerDB
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  3. rs542671663[chr1:10120824]
Enhancers that have rs542671663[chr1:10120824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542671663[chr1:10120824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10120814 10120832 NR3C1 JASPAR yes 26698343
chr1 10120822 10120837 FOXP1 JASPAR yes 26698344
chr1 10120823 10120838 FOXP1 JASPAR yes 26698345
Genes associated with rs542671663[chr1:10120824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More