EnhancerDB
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  3. rs542676404[chr1:8248835]
Enhancers that have rs542676404[chr1:8248835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542676404[chr1:8248835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8248829 8248844 FOXA1 JASPAR yes 26524822
chr1 8248830 8248842 FOXI1 JASPAR yes 26524823
chr1 8248830 8248844 POU4F1 JASPAR yes 26524824
chr1 8248830 8248845 FOXP1 JASPAR yes 26524825
chr1 8248830 8248845 HNF1A JASPAR yes 26524826
chr1 8248831 8248843 FOXC2 JASPAR yes 26524827
chr1 8248831 8248845 ONECUT2 JASPAR yes 26524828
chr1 8248831 8248845 ONECUT3 JASPAR yes 26524829
chr1 8248832 8248843 FOXB1 JASPAR yes 26524830
chr1 8248832 8248843 FOXC1 JASPAR yes 26524831
chr1 8248832 8248843 PROP1 JASPAR yes 26524832
chr1 8248832 8248848 POU4F2 JASPAR yes 26524833
chr1 8248832 8248848 POU4F3 JASPAR yes 26524834
chr1 8248833 8248837 YY1 TRANSFAC yes 26524835
chr1 8248833 8248848 FOXA1 JASPAR yes 26524836
chr1 8248834 8248846 FOXI1 JASPAR yes 26524837
chr1 8248834 8248848 POU4F1 JASPAR yes 26524838
chr1 8248834 8248849 FOXP1 JASPAR yes 26524839
chr1 8248834 8248849 HNF1A JASPAR yes 26524840
chr1 8248835 8248847 FOXC2 JASPAR yes 26524841
chr1 8248835 8248849 ONECUT2 JASPAR yes 26524842
chr1 8248835 8248849 ONECUT3 JASPAR yes 26524843
Genes associated with rs542676404[chr1:8248835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More