EnhancerDB
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  3. rs542699451[chr1:226856240]
Enhancers that have rs542699451[chr1:226856240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542699451[chr1:226856240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226856226 226856247 IRF1 JASPAR yes 35830200
chr1 226856228 226856243 STAT2 JASPAR yes 35830201
chr1 226856232 226856247 MEF2A JASPAR yes 35830202
chr1 226856233 226856245 FOXI1 JASPAR yes 35830203
chr1 226856233 226856248 MEF2C JASPAR yes 35830204
chr1 226856234 226856246 MEF2A JASPAR yes 35830205
chr1 226856234 226856246 MEF2B JASPAR yes 35830206
chr1 226856234 226856246 MEF2D JASPAR yes 35830207
chr1 226856234 226856248 FOXF2 JASPAR yes 35830208
chr1 226856235 226856245 MEF2A JASPAR yes 35830209
chr1 226856236 226856240 YY1 TRANSFAC yes 35830210
Genes associated with rs542699451[chr1:226856240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More