EnhancerDB
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  3. rs542717055[chr16:85242797]
Enhancers that have rs542717055[chr16:85242797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542717055[chr16:85242797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85241608 85242808 TCF7L2 GTRD no Colon (HCT116) 21721175
chr16 85242160 85243044 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721183
chr16 85242408 85242848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721190
chr16 85242684 85243034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721191
chr16 85242790 85242802 NHLH1 JASPAR yes 12032935
Genes associated with rs542717055[chr16:85242797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More