EnhancerDB
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  3. rs542720981[chr1:155618717]
Enhancers that have rs542720981[chr1:155618717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155610085 155625015 enh12291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Uterus Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542720981[chr1:155618717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155618707 155618728 IRF1 JASPAR yes 32357969
chr1 155618710 155618720 GABPA JASPAR yes 32357970
chr1 155618710 155618723 ELF1 JASPAR yes 32357971
chr1 155618710 155618724 SPI1 JASPAR yes 32357972
chr1 155618710 155618724 SPIC JASPAR yes 32357973
chr1 155618711 155618732 IRF1 JASPAR yes 32357974
chr1 155618712 155618733 IRF1 JASPAR yes 32357975
chr1 155618713 155618718 ETS2 TRANSFAC yes 32357976
chr1 155618713 155618734 IRF1 JASPAR yes 32357977
chr1 155618714 155618735 IRF1 JASPAR yes 32357978
chr1 155618715 155618730 FOXP1 JASPAR yes 32357979
chr1 155618715 155618736 IRF1 JASPAR yes 32357980
chr1 155618716 155618731 FOXP1 JASPAR yes 32357981
chr1 155618716 155618737 IRF1 JASPAR yes 32357982
chr1 155618717 155618732 FOXP1 JASPAR yes 32357983
chr1 155618717 155618738 IRF1 JASPAR yes 32357984
Genes associated with rs542720981[chr1:155618717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More