EnhancerDB
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  3. rs542728600[chr6:109061263]
Enhancers that have rs542728600[chr6:109061263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542728600[chr6:109061263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109061252 109061263 FOXA1 JASPAR yes 104200075
chr6 109061253 109061264 FOXC1 JASPAR yes 104200076
chr6 109061253 109061265 FOXC2 JASPAR yes 104200077
chr6 109061258 109061271 ZBTB18 JASPAR yes 104200078
Genes associated with rs542728600[chr6:109061263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More