EnhancerDB
  1. Home
  2. SNP
  3. rs542730589[chr1:19786199]
Enhancers that have rs542730589[chr1:19786199]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542730589[chr1:19786199]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19786178 19786199 IRF1 JASPAR yes 27193347
chr1 19786195 19786210 STAT2 JASPAR yes 27193355
chr1 19786196 19786210 STAT1 JASPAR yes 27193356
Genes associated with rs542730589[chr1:19786199], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More