EnhancerDB
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  3. rs542733648[chr12:96040821]
Enhancers that have rs542733648[chr12:96040821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96013625 96050402 enh14919
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542733648[chr12:96040821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96040549 96041041 SOX2 GTRD no Neural Stem Cells (H9) 21567336
chr12 96040804 96040822 SRF JASPAR yes 123013065
chr12 96040809 96041054 SOX2 GTRD no Neural Stem Cells (H9) 21567337
Genes associated with rs542733648[chr12:96040821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More