EnhancerDB
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  3. rs542754553[chr5:159583043]
Enhancers that have rs542754553[chr5:159583043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542754553[chr5:159583043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159583040 159583055 FOXP1 JASPAR yes 67343899
chr5 159583041 159583056 FOXP1 JASPAR yes 67343900
chr5 159583042 159583057 FOXP1 JASPAR yes 67343901
chr5 159583043 159583058 FOXP1 JASPAR yes 67343902
chr5 159583043 159583064 IRF1 JASPAR yes 67343903
Genes associated with rs542754553[chr5:159583043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More