EnhancerDB
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  3. rs542774101[chr6:47051270]
Enhancers that have rs542774101[chr6:47051270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs542774101[chr6:47051270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47051263 47051274 HOXC12 JASPAR yes 101995138
chr6 47051263 47051274 HOXC13 JASPAR yes 101995139
chr6 47051268 47051274 TBP TRANSFAC yes 101995140
Genes associated with rs542774101[chr6:47051270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More