EnhancerDB
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  3. rs542791493[chr6:44040355]
Enhancers that have rs542791493[chr6:44040355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542791493[chr6:44040355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040343 44040363 RREB1 JASPAR yes 101820655
chr6 44040345 44040355 SP1 JASPAR yes 101820658
chr6 44040345 44040355 ZNF740 JASPAR yes 101820659
chr6 44040346 44040356 SP1 JASPAR yes 101820660
chr6 44040346 44040356 ZNF740 JASPAR yes 101820661
chr6 44040346 44040366 RREB1 JASPAR yes 101820662
chr6 44040348 44040360 TFAP2A JASPAR yes 101820663
chr6 44040349 44040358 TFAP2A JASPAR yes 101820664
Genes associated with rs542791493[chr6:44040355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More