EnhancerDB
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  3. rs542801113[chr1:181087998]
Enhancers that have rs542801113[chr1:181087998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542801113[chr1:181087998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181085828 181091068 ZNF143 GTRD no Epithelial (MCF-7) 21354873
chr1 181086113 181091510 ZNF274 GTRD no Cervix (HeLa-S3) 21354874
chr1 181086617 181091434 ZNF274 GTRD no Blood (GM12878) 21354875
chr1 181086665 181088307 TEF1 GTRD no Bone (Osteoblast) 21354878
chr1 181086780 181093516 ZNF274 GTRD no Bone Marrow (K562) 21354887
chr1 181086781 181091174 ZNF274 GTRD no Bone Marrow (K562) 21354889
chr1 181086784 181091567 ZNF274 GTRD no Blood (GM12878) 21354892
chr1 181086797 181089551 ZNF274 GTRD no Bone Marrow (K562) 21354894
chr1 181086800 181088022 ZNF274 GTRD no Cervix (HeLa-S3) 21354895
chr1 181086812 181088209 ZNF274 GTRD no Cervix (HeLa-S3) 21354899
chr1 181086830 181089324 ZNF274 GTRD no Blood (GM12878) 21354903
chr1 181086838 181089488 ZNF274 GTRD no Bone Marrow (K562) 21354905
chr1 181086838 181093507 ZNF274 GTRD no Blood (GM12878) 21354906
chr1 181086843 181093528 ZNF274 GTRD no Blood (GM12878) 21354907
chr1 181086846 181088704 ZNF274 GTRD no Bone Marrow (K562) 21354908
chr1 181086864 181089132 ZNF274 GTRD no Bone Marrow (K562) 21354913
chr1 181086871 181089134 ZNF274 GTRD no Blood (GM12878) 21354914
chr1 181086887 181088244 ZNF274 GTRD no Bone Marrow (K562) 21354921
chr1 181086916 181089026 ZNF274 GTRD no Bone Marrow (K562) 21354924
chr1 181086924 181089115 ZNF274 GTRD no Blood (GM12878) 21354926
chr1 181086967 181093568 ZNF274 GTRD no Blood (GM12878) 21354929
chr1 181086985 181092363 ZNF274 GTRD no Bone Marrow (K562) 21354931
chr1 181086997 181092217 ZNF274 GTRD no Bone Marrow (K562) 21354932
chr1 181087006 181091597 ZNF274 GTRD no Bone Marrow (K562) 21354933
chr1 181087010 181089113 ZNF274 GTRD no Bone Marrow (K562) 21354934
chr1 181087019 181089513 ZNF274 GTRD no Bone Marrow (K562) 21354935
chr1 181087088 181089478 ZNF274 GTRD no Blood (GM12878) 21354940
chr1 181087089 181091339 ZNF143 GTRD no Epithelial (MCF-7) 21354941
chr1 181087151 181089148 ZNF274 GTRD no Bone Marrow (K562) 21354946
chr1 181087163 181089380 ZNF143 GTRD no Epithelial (MCF-7) 21354948
chr1 181087175 181091253 ZNF274 GTRD no Bone Marrow (K562) 21354949
chr1 181087178 181089370 ZNF143 GTRD no Epithelial (MCF-7) 21354950
chr1 181087245 181089186 ZNF274 GTRD no Blood (GM12878) 21354957
chr1 181087257 181089186 ZNF274 GTRD no Blood (GM12878) 21354959
chr1 181087267 181088074 ZNF274 GTRD no Bone Marrow (K562) 21354960
chr1 181087269 181088003 ZNF274 GTRD no Bone Marrow (K562) 21354961
chr1 181087351 181089485 ZNF274 GTRD no Bone Marrow (K562) 21354971
chr1 181087353 181092359 ZNF274 GTRD no Bone Marrow (K562) 21354972
chr1 181087373 181088231 ZNF143 GTRD no Epithelial (MCF-7) 21354977
chr1 181087379 181089220 ZNF274 GTRD no Bone Marrow (K562) 21354978
chr1 181087380 181089250 ZNF274 GTRD no Blood (GM12878) 21354979
chr1 181087399 181088041 ZNF143 GTRD no Epithelial (MCF-7) 21354981
chr1 181087403 181089227 ZNF274 GTRD no Bone Marrow (K562) 21354983
chr1 181087434 181088082 ZNF274 GTRD no Liver (HepG2) 21354985
chr1 181087562 181088034 ZNF274 GTRD no Blood (GM12878) 21354989
chr1 181087580 181088144 ZNF274 GTRD no Liver (HepG2) 21354990
chr1 181087841 181088209 MYOD GTRD no Muscle (Myoblast) 21354991
chr1 181087870 181091347 ZNF274 GTRD no Bone Marrow (K562) 21354992
chr1 181087882 181089059 ZNF143 GTRD no Epithelial (MCF-7) 21354993
chr1 181087887 181089077 ZNF274 GTRD no Blood (GM12878) 21354994
chr1 181087897 181089158 ZNF274 GTRD no Cervix (HeLa-S3) 21354995
chr1 181087899 181089106 ZNF143 GTRD no Epithelial (MCF-7) 21354996
chr1 181087903 181090770 ZNF274 GTRD no Cervix (HeLa-S3) 21354997
chr1 181087905 181090652 ZNF274 GTRD no Bone Marrow (K562) 21354998
chr1 181087910 181089183 ZNF274 GTRD no Liver (HepG2) 21354999
chr1 181087942 181089864 TCF7L2 GTRD no Colon (HCT116) 21355000
chr1 181087947 181091146 ZNF274 GTRD no Bone Marrow (K562) 21355001
chr1 181087949 181089161 ZNF274 GTRD no Cervix (HeLa-S3) 21355002
chr1 181087951 181089193 ZNF143 GTRD no Epithelial (MCF-7) 21355003
chr1 181087952 181089402 ZNF274 GTRD no Blood (GM12878) 21355004
chr1 181087960 181090528 ZNF274 GTRD no Bone Marrow (K562) 21355005
chr1 181087963 181090639 ZNF143 GTRD no Epithelial (MCF-7) 21355006
chr1 181087966 181089111 ZNF143 GTRD no Epithelial (MCF-7) 21355007
chr1 181087971 181089116 ZNF143 GTRD no Epithelial (MCF-7) 21355008
chr1 181087971 181089443 ZNF274 GTRD no Bone Marrow (K562) 21355009
chr1 181087975 181091215 ZNF274 GTRD no Bone Marrow (K562) 21355010
chr1 181087982 181089071 ZNF143 GTRD no Epithelial (MCF-7) 21355011
chr1 181087985 181092456 ZNF274 GTRD no Blood (GM12878) 21355012
chr1 181087986 181090459 ZNF274 GTRD no Bone Marrow (K562) 21355013
chr1 181087989 181089124 ZNF143 GTRD no Epithelial (MCF-7) 21355014
chr1 181087992 181090398 ZNF143 GTRD no Epithelial (MCF-7) 21355015
chr1 181087994 181089074 ZNF274 GTRD no Bone Marrow (K562) 21355016
Genes associated with rs542801113[chr1:181087998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More