EnhancerDB
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  3. rs542840964[chr15:67400015]
Enhancers that have rs542840964[chr15:67400015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542840964[chr15:67400015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67398072 67400618 ZNF274 GTRD no Bone Marrow (K562) 21662595
chr15 67398072 67400618 ZNF274 GTRD no Bone Marrow (K562) 108149437
chr15 67398153 67400534 ZNF274 GTRD no Bone Marrow (K562) 21662596
chr15 67398153 67400534 ZNF274 GTRD no Bone Marrow (K562) 108149438
chr15 67399598 67400068 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21662649
chr15 67399598 67400068 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108149519
chr15 67399615 67400135 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662650
chr15 67399615 67400135 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149520
chr15 67399744 67400566 ZNF274 GTRD no Bone Marrow (K562) 21662654
chr15 67399744 67400566 ZNF274 GTRD no Bone Marrow (K562) 108149524
chr15 67399748 67400529 ZNF274 GTRD no Bone Marrow (K562) 21662655
chr15 67399748 67400529 ZNF274 GTRD no Bone Marrow (K562) 108149525
chr15 67399751 67400470 ZNF274 GTRD no Bone Marrow (K562) 21662656
chr15 67399751 67400470 ZNF274 GTRD no Bone Marrow (K562) 108149526
chr15 67399772 67400511 ZNF274 GTRD no Bone Marrow (K562) 21662657
chr15 67399772 67400511 ZNF274 GTRD no Bone Marrow (K562) 108149527
chr15 67400002 67400023 ZNF263 JASPAR yes 24208416
chr15 67400005 67400026 ZNF263 JASPAR yes 24208417
Genes associated with rs542840964[chr15:67400015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More