EnhancerDB
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  3. rs542925965[chr14:69393210]
Enhancers that have rs542925965[chr14:69393210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 69381325 69440395 enh15724
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542925965[chr14:69393210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 69393204 69393213 SNAI2 JASPAR yes 116269892
chr14 69393204 69393214 FIGLA JASPAR yes 116269893
chr14 69393204 69393214 ID4 JASPAR yes 116269894
chr14 69393204 69393214 MSC JASPAR yes 116269895
chr14 69393204 69393214 MYF6 JASPAR yes 116269896
chr14 69393204 69393214 TCF3 JASPAR yes 116269897
chr14 69393204 69393214 TCF4 JASPAR yes 116269898
chr14 69393209 69393222 SMAD2 JASPAR yes 116269899
Genes associated with rs542925965[chr14:69393210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More