EnhancerDB
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  3. rs542936386[chr1:16214743]
Enhancers that have rs542936386[chr1:16214743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542936386[chr1:16214743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16214738 16214753 MEF2C JASPAR yes 27011232
chr1 16214739 16214754 MEF2A JASPAR yes 27011233
chr1 16214740 16214752 MEF2A JASPAR yes 27011234
chr1 16214740 16214752 MEF2B JASPAR yes 27011235
chr1 16214740 16214752 MEF2D JASPAR yes 27011236
chr1 16214741 16214751 MEF2A JASPAR yes 27011237
chr1 16214743 16214755 IRF1 JASPAR yes 27011238
chr1 16214743 16214758 STAT2 JASPAR yes 27011239
Genes associated with rs542936386[chr1:16214743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More