EnhancerDB
  1. Home
  2. SNP
  3. rs542948977[chr17:2104623]
Enhancers that have rs542948977[chr17:2104623]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542948977[chr17:2104623]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2104612 2104623 HOXA10 JASPAR yes 52736438
chr17 2104613 2104623 HOXA13 JASPAR yes 52736440
chr17 2104613 2104623 HOXB13 JASPAR yes 52736441
chr17 2104613 2104623 HOXD13 JASPAR yes 52736442
chr17 2104618 2104630 TAL1 JASPAR yes 52736443
chr17 2104620 2104632 TAL1 JASPAR yes 52736444
Genes associated with rs542948977[chr17:2104623], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More