EnhancerDB
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  3. rs542959032[chr11:122532588]
Enhancers that have rs542959032[chr11:122532588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542959032[chr11:122532588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122532571 122532592 IRF1 JASPAR yes 42015851
chr11 122532572 122532593 IRF1 JASPAR yes 42015852
chr11 122532573 122532593 RREB1 JASPAR yes 42015854
chr11 122532576 122532591 FOXP1 JASPAR yes 42015856
chr11 122532577 122532598 IRF1 JASPAR yes 42015857
chr11 122532578 122532593 FOXP1 JASPAR yes 42015858
chr11 122532578 122532598 RREB1 JASPAR yes 42015859
Genes associated with rs542959032[chr11:122532588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More