EnhancerDB
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  3. rs542962001[chr6:15917346]
Enhancers that have rs542962001[chr6:15917346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15886429 15917995 enh8970
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs542962001[chr6:15917346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15917330 15917347 RARA JASPAR yes 100254402
chr6 15917339 15917346 E2F1 TRANSFAC yes 100254403
chr6 15917340 15917354 TLX1 JASPAR yes 100254404
Genes associated with rs542962001[chr6:15917346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More