EnhancerDB
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  3. rs542969402[chr17:65397985]
Enhancers that have rs542969402[chr17:65397985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542969402[chr17:65397985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65397964 65397985 IRF1 JASPAR yes 55498480
chr17 65397968 65397989 IRF1 JASPAR yes 55498481
chr17 65397969 65397990 IRF1 JASPAR yes 55498483
chr17 65397973 65397988 STAT2 JASPAR yes 55498484
chr17 65397974 65397989 FOXP1 JASPAR yes 55498485
chr17 65397983 65397999 SOX8 JASPAR yes 55498486
Genes associated with rs542969402[chr17:65397985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More