EnhancerDB
  1. Home
  2. SNP
  3. rs542999486[chr1:235111542]
Enhancers that have rs542999486[chr1:235111542]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542999486[chr1:235111542]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235111126 235112364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402231
chr1 235111126 235112364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107885148
chr1 235111133 235111657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402232
chr1 235111133 235111657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885149
chr1 235111157 235111661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402233
chr1 235111157 235111661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885150
chr1 235111177 235111733 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402236
chr1 235111177 235111733 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885153
chr1 235111194 235111630 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107885154
chr1 235111425 235111695 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402237
chr1 235111541 235111549 EHF JASPAR yes 36337152
chr1 235111541 235111551 SP1 JASPAR yes 36337153
Genes associated with rs542999486[chr1:235111542], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More