EnhancerDB
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  3. rs543055999[chr12:116960395]
Enhancers that have rs543055999[chr12:116960395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543055999[chr12:116960395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116959710 116960734 ZNF274 GTRD no Blood (GM12878) 21577187
chr12 116959834 116960857 ZNF274 GTRD no Blood (GM12878) 21577191
chr12 116959845 116960433 ZBTB33 GTRD no Brain (SK-N-SH) 21577192
chr12 116959883 116960956 ZNF274 GTRD no Blood (GM12878) 21577194
chr12 116959916 116960718 ZNF274 GTRD no Blood (GM12878) 21577195
chr12 116959916 116960964 ZNF274 GTRD no Blood (GM12878) 21577196
chr12 116959919 116960726 ZNF274 GTRD no Blood (GM12878) 21577197
chr12 116959931 116960756 ZNF274 GTRD no Blood (GM12878) 21577198
chr12 116959944 116960548 ZNF274 GTRD no Blood (GM12878) 21577199
chr12 116959962 116960579 ZNF274 GTRD no Blood (GM12878) 21577200
chr12 116959970 116960651 ZNF274 GTRD no Blood (GM12878) 21577201
chr12 116959990 116960522 ZNF274 GTRD no Blood (GM12878) 21577202
chr12 116960006 116960688 ZNF274 GTRD no Blood (GM12878) 21577203
chr12 116960022 116960663 ZNF274 GTRD no Blood (GM12878) 21577204
chr12 116960032 116960517 ZNF274 GTRD no Blood (GM12878) 21577205
chr12 116960050 116960545 ZNF274 GTRD no Blood (GM12878) 21577206
chr12 116960065 116960801 ZNF274 GTRD no Blood (GM12878) 21577207
chr12 116960068 116960476 ZNF274 GTRD no Blood (GM12878) 21577208
chr12 116960071 116960556 ZNF274 GTRD no Blood (GM12878) 21577209
chr12 116960073 116960494 ZNF274 GTRD no Blood (GM12878) 21577210
chr12 116960084 116960680 ZNF274 GTRD no Blood (GM12878) 21577211
chr12 116960100 116960470 ZNF274 GTRD no Blood (GM12878) 21577212
chr12 116960104 116960667 ZNF274 GTRD no Blood (GM12878) 21577213
chr12 116960109 116960470 ZNF274 GTRD no Blood (GM12878) 21577214
chr12 116960110 116960504 ZNF274 GTRD no Blood (GM12878) 21577215
chr12 116960118 116960583 ZNF274 GTRD no Blood (GM12878) 21577216
chr12 116960123 116960510 ZNF274 GTRD no Blood (GM12878) 21577217
chr12 116960132 116960469 ZNF274 GTRD no Blood (GM12878) 21577218
chr12 116960146 116960431 ZNF274 GTRD no Blood (GM12878) 21577219
chr12 116960161 116960497 ZNF274 GTRD no Blood (GM12878) 21577220
chr12 116960168 116960693 ZNF274 GTRD no Blood (GM12878) 21577221
chr12 116960180 116960446 ZNF274 GTRD no Blood (GM12878) 21577222
chr12 116960183 116960697 ZNF274 GTRD no Blood (GM12878) 21577223
chr12 116960184 116960649 ZNF274 GTRD no Blood (GM12878) 21577224
chr12 116960215 116960452 ZNF274 GTRD no Cervix (HeLa-S3) 21577225
chr12 116960246 116960443 ZNF274 GTRD no Blood (GM12878) 21577226
chr12 116960384 116960404 RREB1 JASPAR yes 124006073
chr12 116960390 116960396 NFIC JASPAR yes 124006074
Genes associated with rs543055999[chr12:116960395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More