EnhancerDB
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  3. rs543100030[chr17:49013390]
Enhancers that have rs543100030[chr17:49013390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543100030[chr17:49013390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49011964 49014278 ZNF274 GTRD no Liver (HepG2) 21771195
chr17 49012063 49013848 ZNF274 GTRD no Liver (HepG2) 21771198
chr17 49012066 49014035 ZNF274 GTRD no Liver (HepG2) 21771200
chr17 49012125 49014038 ZNF274 GTRD no Liver (HepG2) 21771202
chr17 49012207 49013855 ZNF274 GTRD no Liver (HepG2) 21771206
chr17 49012251 49014869 ZNF274 GTRD no Liver (HepG2) 21771209
chr17 49012260 49014167 ZNF274 GTRD no Liver (HepG2) 21771210
chr17 49012300 49013855 ZNF274 GTRD no Liver (HepG2) 21771213
chr17 49012360 49013969 ZNF274 GTRD no Liver (HepG2) 21771217
chr17 49012374 49014275 ZNF274 GTRD no Liver (HepG2) 21771219
chr17 49012380 49013924 ZNF274 GTRD no Liver (HepG2) 21771220
chr17 49012389 49013612 ZNF143 GTRD no Epithelial (MCF-7) 21771221
chr17 49012397 49013912 ZNF274 GTRD no Liver (HepG2) 21771222
chr17 49012405 49014010 ZNF274 GTRD no Liver (HepG2) 21771223
chr17 49012414 49014049 ZNF274 GTRD no Liver (HepG2) 21771224
chr17 49012457 49013556 ZNF143 GTRD no Epithelial (MCF-7) 21771226
chr17 49012458 49013511 ZNF143 GTRD no Epithelial (MCF-7) 21771227
chr17 49012477 49013513 ZNF143 GTRD no Epithelial (MCF-7) 21771229
chr17 49012477 49014110 ZNF274 GTRD no Liver (HepG2) 21771230
chr17 49012487 49013788 ZNF274 GTRD no Liver (HepG2) 21771232
chr17 49012494 49013514 ZNF274 GTRD no Liver (HepG2) 21771234
chr17 49012508 49014005 ZNF274 GTRD no Liver (HepG2) 21771235
chr17 49012546 49013494 ZNF143 GTRD no Epithelial (MCF-7) 21771237
chr17 49012557 49013486 ZNF143 GTRD no Epithelial (MCF-7) 21771238
chr17 49012582 49013512 ZNF143 GTRD no Epithelial (MCF-7) 21771243
chr17 49012615 49013425 ZNF274 GTRD no Liver (HepG2) 21771247
chr17 49012628 49013554 ZNF274 GTRD no Liver (HepG2) 21771251
chr17 49012636 49013985 ZNF143 GTRD no Epithelial (MCF-7) 21771252
chr17 49012649 49013499 ZNF143 GTRD no Epithelial (MCF-7) 21771254
chr17 49012698 49014135 ZNF274 GTRD no Liver (HepG2) 21771263
chr17 49012708 49013419 ZNF274 GTRD no Bone Marrow (K562) 21771266
chr17 49012883 49013453 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21771290
chr17 49012899 49015098 ZNF143 GTRD no Epithelial (MCF-7) 21771293
chr17 49013065 49014150 ZNF274 GTRD no Liver (HepG2) 21771296
chr17 49013165 49015788 TCF7L2 GTRD no Colon (HCT116) 21771298
chr17 49013173 49014851 ZNF274 GTRD no Liver (HepG2) 21771299
chr17 49013180 49015472 TCF7L2 GTRD no Colon (HCT116) 21771300
chr17 49013184 49013398 ZNF274 GTRD no Liver (HepG2) 21771301
chr17 49013188 49014207 ZNF274 GTRD no Liver (HepG2) 21771302
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771303
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771304
chr17 49013195 49015334 TCF7L2 GTRD no Colon (HCT116) 21771305
chr17 49013195 49015944 TCF7L2 GTRD no Colon (HCT116) 21771306
chr17 49013203 49015168 ZNF143 GTRD no Epithelial (MCF-7) 21771307
chr17 49013233 49015235 ZNF143 GTRD no Epithelial (MCF-7) 21771308
chr17 49013233 49015235 ZNF143 GTRD no Epithelial (MCF-7) 21771309
chr17 49013238 49015440 TCF7L2 GTRD no Colon (HCT116) 21771310
chr17 49013252 49013644 SOX2 GTRD no Neural Stem Cells (H9) 21771311
chr17 49013253 49014830 SOX2 GTRD no Neural Stem Cells (H9) 21771312
chr17 49013257 49013998 ZNF274 GTRD no Liver (HepG2) 21771313
chr17 49013312 49014318 SOX2 GTRD no Neural Stem Cells (H9) 21771314
chr17 49013331 49014503 SOX2 GTRD no Neural Stem Cells (H9) 21771315
chr17 49013346 49013939 ZNF274 GTRD no Liver (HepG2) 21771316
chr17 49013374 49014812 ZNF274 GTRD no Bone Marrow (K562) 21771317
chr17 49013374 49015145 ZNF143 GTRD no Epithelial (MCF-7) 21771318
chr17 49013389 49013851 ZNF274 GTRD no Liver (HepG2) 21771319
Genes associated with rs543100030[chr17:49013390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More