EnhancerDB
  1. Home
  2. SNP
  3. rs543112829[chr10:21660350]
Enhancers that have rs543112829[chr10:21660350]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543112829[chr10:21660350]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21660319 21660942 TCF7L2 GTRD no Colon (HCT116) 21421069
chr10 21660336 21660351 PRDM1 JASPAR yes 125903237
chr10 21660338 21660359 IRF1 JASPAR yes 125903238
chr10 21660340 21660361 ZNF263 JASPAR yes 125903239
chr10 21660341 21660355 IRF7 JASPAR yes 125903240
chr10 21660342 21660357 PRDM1 JASPAR yes 125903241
chr10 21660343 21660364 ZNF263 JASPAR yes 125903242
chr10 21660344 21660359 FOXP1 JASPAR yes 125903243
chr10 21660344 21660365 IRF1 JASPAR yes 125903244
chr10 21660345 21660360 FOXP1 JASPAR yes 125903245
chr10 21660345 21660366 IRF1 JASPAR yes 125903246
chr10 21660346 21660361 FOXP1 JASPAR yes 125903247
chr10 21660346 21660367 IRF1 JASPAR yes 125903248
chr10 21660347 21660362 FOXP1 JASPAR yes 125903249
chr10 21660347 21660368 IRF1 JASPAR yes 125903250
chr10 21660348 21660363 FOXP1 JASPAR yes 125903251
chr10 21660350 21660365 FOXP1 JASPAR yes 125903252
Genes associated with rs543112829[chr10:21660350], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More