EnhancerDB
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  3. rs543124624[chr1:117423360]
Enhancers that have rs543124624[chr1:117423360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs543124624[chr1:117423360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117423350 117423364 SPI1 JASPAR yes 31848299
chr1 117423350 117423364 SPIC JASPAR yes 31848300
chr1 117423353 117423371 SRF JASPAR yes 31848301
chr1 117423358 117423362 YY1 TRANSFAC yes 31848302
Genes associated with rs543124624[chr1:117423360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More