EnhancerDB
  1. Home
  2. SNP
  3. rs543127428[chr2:70324572]
Enhancers that have rs543127428[chr2:70324572]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543127428[chr2:70324572]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70324567 70324582 MEF2C JASPAR yes 74893529
chr2 70324567 70324588 IRF1 JASPAR yes 74893530
chr2 70324568 70324583 FOXP1 JASPAR yes 74893531
chr2 70324568 70324589 IRF1 JASPAR yes 74893532
chr2 70324569 70324584 FOXP1 JASPAR yes 74893533
chr2 70324570 70324585 FOXP1 JASPAR yes 74893534
chr2 70324570 70324591 IRF1 JASPAR yes 74893535
chr2 70324571 70324586 FOXP1 JASPAR yes 74893536
chr2 70324571 70324592 IRF1 JASPAR yes 74893537
chr2 70324572 70324587 FOXP1 JASPAR yes 74893538
chr2 70324572 70324593 IRF1 JASPAR yes 74893539
Genes associated with rs543127428[chr2:70324572], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More