EnhancerDB
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  3. rs543277541[chr1:27050692]
Enhancers that have rs543277541[chr1:27050692]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27041525 27053715 enh11655
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27049620 27050905 vista21
VISTA
Transcript factors that have rs543277541[chr1:27050692]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27050685 27050705 TP63 JASPAR yes 27653421
chr1 27050685 27050705 TP63 JASPAR yes 71124702
chr1 27050686 27050704 TP53 JASPAR yes 27653422
chr1 27050686 27050704 TP63 JASPAR yes 27653423
chr1 27050686 27050704 TP53 JASPAR yes 71124703
chr1 27050686 27050704 TP63 JASPAR yes 71124704
chr1 27050687 27050702 TP53 JASPAR yes 27653424
chr1 27050687 27050702 TP53 JASPAR yes 71124705
Genes associated with rs543277541[chr1:27050692], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More