EnhancerDB
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  3. rs543296906[chr12:122595623]
Enhancers that have rs543296906[chr12:122595623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543296906[chr12:122595623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122595620 122595635 FOXP1 JASPAR yes 124267262
chr12 122595621 122595636 FOXP1 JASPAR yes 124267263
chr12 122595622 122595637 FOXP1 JASPAR yes 124267264
chr12 122595622 122595643 IRF1 JASPAR yes 124267265
chr12 122595623 122595638 FOXP1 JASPAR yes 124267266
chr12 122595623 122595644 IRF1 JASPAR yes 124267267
Genes associated with rs543296906[chr12:122595623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More