EnhancerDB
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  3. rs543323254[chr16:11404944]
Enhancers that have rs543323254[chr16:11404944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs543323254[chr16:11404944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11401128 11404956 ZNF143 GTRD no Epithelial (MCF-7) 21690406
chr16 11401128 11404956 ZNF143 GTRD no Epithelial (MCF-7) 108181244
chr16 11404339 11406500 ZNF274 GTRD no Bone Marrow (K562) 108181293
chr16 11404555 11406203 ZNF143 GTRD no Epithelial (MCF-7) 21690444
chr16 11404555 11406203 ZNF143 GTRD no Epithelial (MCF-7) 108181294
chr16 11404564 11406361 ZNF143 GTRD no Epithelial (MCF-7) 21690445
chr16 11404564 11406361 ZNF143 GTRD no Epithelial (MCF-7) 108181295
chr16 11404603 11406330 ZNF274 GTRD no Liver (HepG2) 21690446
chr16 11404603 11406330 ZNF274 GTRD no Liver (HepG2) 108181296
chr16 11404736 11406190 ZNF274 GTRD no Liver (HepG2) 21690447
chr16 11404736 11406190 ZNF274 GTRD no Liver (HepG2) 108181297
chr16 11404738 11406149 ZNF274 GTRD no Cervix (HeLa-S3) 21690448
chr16 11404738 11406149 ZNF274 GTRD no Cervix (HeLa-S3) 108181298
chr16 11404941 11404956 TFAP2C JASPAR yes 9504669
chr16 11404942 11404953 EBF1 JASPAR yes 9504670
Genes associated with rs543323254[chr16:11404944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More