EnhancerDB
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  3. rs543324959[chr1:39664027]
Enhancers that have rs543324959[chr1:39664027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543324959[chr1:39664027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39664013 39664028 MEF2C JASPAR yes 28266292
chr1 39664014 39664029 MEF2A JASPAR yes 28266293
chr1 39664015 39664027 MEF2A JASPAR yes 28266294
chr1 39664015 39664027 MEF2B JASPAR yes 28266295
chr1 39664015 39664027 MEF2D JASPAR yes 28266296
Genes associated with rs543324959[chr1:39664027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More