EnhancerDB
  1. Home
  2. SNP
  3. rs543334395[chr2:235871107]
Enhancers that have rs543334395[chr2:235871107]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235861765 235887439 enh19351
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543334395[chr2:235871107]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235871098 235871110 MEF2A JASPAR yes 81923354
chr2 235871098 235871110 MEF2B JASPAR yes 81923355
chr2 235871098 235871110 MEF2D JASPAR yes 81923356
chr2 235871100 235871111 CDX2 JASPAR yes 81923357
chr2 235871100 235871115 FOXP1 JASPAR yes 81923358
chr2 235871101 235871112 HOXA10 JASPAR yes 81923359
chr2 235871102 235871111 CDX1 JASPAR yes 81923360
chr2 235871102 235871112 HOXA13 JASPAR yes 81923361
chr2 235871102 235871112 HOXB13 JASPAR yes 81923362
chr2 235871102 235871112 HOXD13 JASPAR yes 81923363
chr2 235871106 235871112 TBP TRANSFAC yes 81923364
Genes associated with rs543334395[chr2:235871107], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More