EnhancerDB
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  3. rs543420758[chr17:80512298]
Enhancers that have rs543420758[chr17:80512298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543420758[chr17:80512298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80512283 80512299 POU4F2 JASPAR yes 56374214
chr17 80512283 80512299 POU4F3 JASPAR yes 56374215
chr17 80512295 80512307 POU3F1 JASPAR yes 56374217
chr17 80512295 80512307 POU3F2 JASPAR yes 56374218
chr17 80512295 80512309 STAT1 JASPAR yes 56374219
chr17 80512296 80512306 NFATC3 JASPAR yes 56374220
Genes associated with rs543420758[chr17:80512298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More