EnhancerDB
  1. Home
  2. SNP
  3. rs543473173[chr1:24625304]
Enhancers that have rs543473173[chr1:24625304]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543473173[chr1:24625304]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24625284 24625305 ZNF263 JASPAR yes 27497864
chr1 24625287 24625308 ZNF263 JASPAR yes 27497866
chr1 24625288 24625309 IRF1 JASPAR yes 27497867
chr1 24625292 24625307 PRDM1 JASPAR yes 27497868
chr1 24625296 24625317 ZNF263 JASPAR yes 27497869
chr1 24625300 24625321 IRF1 JASPAR yes 27497870
chr1 24625301 24625316 FOXP1 JASPAR yes 27497871
chr1 24625302 24625316 GATA2 JASPAR yes 27497872
chr1 24625304 24625312 GATA3 JASPAR yes 27497873
chr1 24625304 24625319 STAT2 JASPAR yes 27497874
chr1 24625304 24625325 IRF1 JASPAR yes 27497875
Genes associated with rs543473173[chr1:24625304], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More