EnhancerDB
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  3. rs543562966[chr7:104571238]
Enhancers that have rs543562966[chr7:104571238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 104560705 104609919 enh9963
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543562966[chr7:104571238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 104571217 104571238 IRF1 JASPAR yes 16913642
chr7 104571218 104571239 IRF1 JASPAR yes 16913644
chr7 104571222 104571243 IRF1 JASPAR yes 16913646
chr7 104571223 104571238 FOXP1 JASPAR yes 16913647
chr7 104571223 104571244 IRF1 JASPAR yes 16913648
chr7 104571227 104571248 IRF1 JASPAR yes 16913649
chr7 104571228 104571243 FOXP1 JASPAR yes 16913650
chr7 104571230 104571245 FOXP1 JASPAR yes 16913651
chr7 104571232 104571247 FOXP1 JASPAR yes 16913652
chr7 104571233 104571248 FOXP1 JASPAR yes 16913653
chr7 104571234 104571249 FOXP1 JASPAR yes 16913654
chr7 104571235 104571250 FOXP1 JASPAR yes 16913655
Genes associated with rs543562966[chr7:104571238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More