EnhancerDB
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  3. rs543607308[chr18:55943427]
Enhancers that have rs543607308[chr18:55943427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs543607308[chr18:55943427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55943409 55943430 IRF1 JASPAR yes 110935470
chr18 55943413 55943427 IRF7 JASPAR yes 110935474
chr18 55943413 55943427 IRF8 JASPAR yes 110935475
chr18 55943413 55943428 IRF9 JASPAR yes 110935476
chr18 55943414 55943435 IRF1 JASPAR yes 110935477
chr18 55943415 55943436 IRF1 JASPAR yes 110935478
chr18 55943418 55943432 STAT1 JASPAR yes 110935479
chr18 55943419 55943431 IRF1 JASPAR yes 110935480
chr18 55943419 55943433 IRF7 JASPAR yes 110935481
chr18 55943419 55943434 IRF9 JASPAR yes 110935482
chr18 55943420 55943441 IRF1 JASPAR yes 110935483
chr18 55943421 55943442 IRF1 JASPAR yes 110935484
chr18 55943422 55943443 IRF1 JASPAR yes 110935485
chr18 55943423 55943444 IRF1 JASPAR yes 110935486
chr18 55943425 55943440 FOXP1 JASPAR yes 110935487
chr18 55943426 55943441 FOXP1 JASPAR yes 110935488
chr18 55943427 55943442 FOXP1 JASPAR yes 110935489
Genes associated with rs543607308[chr18:55943427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More