EnhancerDB
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  3. rs543610189[chr5:79544332]
Enhancers that have rs543610189[chr5:79544332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs543610189[chr5:79544332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79544318 79544333 HSF1 JASPAR yes 63712612
chr5 79544319 79544332 HSF1 JASPAR yes 63712613
chr5 79544319 79544332 HSF2 JASPAR yes 63712614
chr5 79544319 79544332 HSF4 JASPAR yes 63712615
chr5 79544322 79544333 NFKB1 JASPAR yes 63712616
chr5 79544323 79544334 NFKB1 JASPAR yes 63712617
chr5 79544326 79544336 NFATC3 JASPAR yes 63712618
chr5 79544327 79544334 NFATC2 JASPAR yes 63712619
chr5 79544330 79544339 NKX3-2 JASPAR yes 63712620
chr5 79544331 79544339 ISL2 JASPAR yes 63712621
Genes associated with rs543610189[chr5:79544332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More