EnhancerDB
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  3. rs543633253[chr17:57829639]
Enhancers that have rs543633253[chr17:57829639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543633253[chr17:57829639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57829252 57829936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775260
chr17 57829252 57829936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276351
chr17 57829280 57829910 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775261
chr17 57829280 57829910 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276352
chr17 57829631 57829645 SPI1 JASPAR yes 55077106
chr17 57829631 57829645 SPIC JASPAR yes 55077107
Genes associated with rs543633253[chr17:57829639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More