EnhancerDB
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  3. rs543644409[chr15:99401228]
Enhancers that have rs543644409[chr15:99401228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99392124 99430186 enh16459
Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr15 99401021 99401241 vista21394
VISTA
Transcript factors that have rs543644409[chr15:99401228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99401189 99401738 ZNF143 GTRD no Epithelial (MCF-7) 21681641
chr15 99401189 99401738 ZNF143 GTRD no Epithelial (MCF-7) 108167800
chr15 99401226 99401233 NKX3-1 JASPAR yes 25841116
chr15 99401226 99401233 NKX3-1 JASPAR yes 70593024
Genes associated with rs543644409[chr15:99401228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More