EnhancerDB
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  3. rs543671858[chr11:12827434]
Enhancers that have rs543671858[chr11:12827434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543671858[chr11:12827434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12827428 12827449 IRF1 JASPAR yes 37480087
chr11 12827430 12827445 STAT2 JASPAR yes 37480088
chr11 12827432 12827444 IRF1 JASPAR yes 37480089
Genes associated with rs543671858[chr11:12827434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More