EnhancerDB
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  3. rs543709673[chr3:58019744]
Enhancers that have rs543709673[chr3:58019744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543709673[chr3:58019744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58019740 58019748 TBX5 JASPAR yes 2666994
chr3 58019740 58019749 ZEB1 JASPAR yes 2666995
chr3 58019740 58019753 ZBTB18 JASPAR yes 2666996
chr3 58019741 58019751 ID4 JASPAR yes 2666997
chr3 58019741 58019751 TCF3 JASPAR yes 2666998
chr3 58019741 58019751 TCF4 JASPAR yes 2666999
chr3 58019743 58019748 USF2 TRANSFAC yes 2667000
Genes associated with rs543709673[chr3:58019744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More