EnhancerDB
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  3. rs543739400[chr12:46793405]
Enhancers that have rs543739400[chr12:46793405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46792249 46810655 enh47577
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs543739400[chr12:46793405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46792628 46794635 AR GTRD no Prostate (PC-3) 21541362
chr12 46792711 46793433 ZNF274 GTRD no Liver (HepG2) 21541363
chr12 46792881 46793432 ZNF274 GTRD no Liver (HepG2) 21541366
chr12 46793396 46793408 POU2F1 JASPAR yes 120615783
chr12 46793396 46793409 POU3F3 JASPAR yes 120615784
chr12 46793396 46793410 POU1F1 JASPAR yes 120615785
chr12 46793397 46793409 POU3F1 JASPAR yes 120615786
chr12 46793397 46793409 POU3F2 JASPAR yes 120615787
chr12 46793397 46793410 POU2F2 JASPAR yes 120615788
chr12 46793398 46793407 POU3F4 JASPAR yes 120615789
chr12 46793398 46793407 POU5F1B JASPAR yes 120615790
chr12 46793399 46793406 POU2F1 TRANSFAC yes 120615791
chr12 46793399 46793406 POU2F2 TRANSFAC yes 120615792
chr12 46793402 46793414 IRF1 JASPAR yes 120615793
Genes associated with rs543739400[chr12:46793405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More