EnhancerDB
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  3. rs543791117[chr19:2624354]
Enhancers that have rs543791117[chr19:2624354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543791117[chr19:2624354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 21837677
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363248
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363249
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363250
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363251
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 21837827
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363412
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363413
chr19 2624209 2625468 ZNF274 GTRD no Cervix (HeLa-S3) 21837828
chr19 2624209 2625468 ZNF274 GTRD no Cervix (HeLa-S3) 108363414
chr19 2624335 2625237 TCF7L2 GTRD no Colon (HCT116) 21837829
chr19 2624335 2625237 TCF7L2 GTRD no Colon (HCT116) 108363415
chr19 2624342 2624355 NFKB1 JASPAR yes 112084954
chr19 2624342 2624355 NFKB2 JASPAR yes 112084955
chr19 2624345 2625409 TCF7L2 GTRD no Colon (HCT116) 21837830
chr19 2624345 2625409 TCF7L2 GTRD no Colon (HCT116) 108363416
chr19 2624350 2624360 SP1 JASPAR yes 112084956
chr19 2624351 2625028 ZNF274 GTRD no Blood (GM12878) 21837831
chr19 2624351 2625028 ZNF274 GTRD no Blood (GM12878) 108363417
Genes associated with rs543791117[chr19:2624354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More