EnhancerDB
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  3. rs543836505[chr3:58027974]
Enhancers that have rs543836505[chr3:58027974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543836505[chr3:58027974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58027962 58027976 TCF7L2 JASPAR yes 2668334
chr3 58027969 58027979 GCM2 JASPAR yes 2668337
chr3 58027969 58027980 GCM1 JASPAR yes 2668338
Genes associated with rs543836505[chr3:58027974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More