EnhancerDB
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  3. rs543857620[chr11:122592083]
Enhancers that have rs543857620[chr11:122592083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543857620[chr11:122592083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122592074 122592089 ZIC3 JASPAR yes 42024277
chr11 122592074 122592089 ZIC4 JASPAR yes 42024278
chr11 122592075 122592089 GLIS2 JASPAR yes 42024279
chr11 122592075 122592089 ZIC1 JASPAR yes 42024280
chr11 122592079 122592089 ZNF740 JASPAR yes 42024281
chr11 122592081 122592091 ZNF740 JASPAR yes 42024282
chr11 122592082 122592092 SP1 JASPAR yes 42024283
Genes associated with rs543857620[chr11:122592083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More